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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11213438 chr11:110365144 A/G EI24 chr11:125439112-125454582:+ 1.01 6.7 7.27E-11 Box Plot
BLCA rs11213438 chr11:110365144 A/G FDXACB1 chr11:111744780-111751967:- 0.92 6.51 2.3E-10 Box Plot
BLCA rs11213438 chr11:110365144 A/G PUS3 chr11:125763380-125773116:- 0.94 6.34 6.53E-10 Box Plot
BLCA rs11213438 chr11:110365144 A/G SRPR chr11:126132882-126138949:- 0.93 6.07 3.14E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G STT3A chr11:125461607-125495110:+ 0.85 6.04 3.57E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G TIMM8B chr11:111955524-111957522:- 0.72 6.17 1.77E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G TIRAP chr11:126152960-126168740:+ 0.82 6.15 1.94E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G ZW10 chr11:113603909-113644533:- 0.8 6.92 1.92E-11 Box Plot
BLCA rs11216478 chr11:117511224 A/G RNF26 chr11:119205237-119208023:+ -0.72 -6.27 9.79E-10 Box Plot
BLCA rs11217201 chr11:119105692 A/C EI24 chr11:125439112-125454582:+ -0.81 -5.98 5.22E-9 Box Plot
BLCA rs11217201 chr11:119105692 A/C SRPR chr11:126132882-126138949:- -0.88 -6.49 2.69E-10 Box Plot
BLCA rs11217201 chr11:119105692 A/C ZW10 chr11:113603909-113644533:- -0.64 -6.15 1.99E-9 Box Plot
BLCA rs11220343 chr11:125953133 C/T ARCN1 chr11:118443105-118473748:+ 0.72 6.33 6.67E-10 Box Plot
BLCA rs11220343 chr11:125953133 C/T DLAT chr11:111895538-111935114:+ 0.66 6.22 1.27E-9 Box Plot
BLCA rs11220343 chr11:125953133 C/T RBM7 chr11:114270752-114284925:+ 0.65 6.14 2.09E-9 Box Plot